Project Blog
CS 298
Week #9 - 26th March 2024
- Give up on Silhouette method - computation high even for reduced dataset
- Hierarchical clustering - try 1/8 or 1/16 dataset or keep halving
- Try kmeans, hierarchical for different organ- brain data
Week #8 - 19th March 2024
- Manually plot elbow method graph for the generated values, then select the range and plot for k, perform k-means
- Try silhouette method with reduced dataset
- Hierarchical clustering - take 1/4 dataset and try to plot dendrogram
Week #7 - 12th March 2024
- Check k=1 to see if k-means is working on dataset
- Print k, wsse, silhouette score for elbow and silhouette methods to ensure they are working
- Plot Hierarchical clustering dendrogram
Week #6 - 5th March 2024
- Double k value for Elbow and Silhouette methods and check if code works. Then for specific range of k, execute both methods for optimal k value
- Hierarchical - methods for optimal no. of clusters: slides
Week #5 - 27th February 2024
- Make changes to Elbow and Silhouette methods to resolve error
Week #4 - 20th February 2024
- Implement Elbow and Silhouette methods to find optimal k value
Week #1,2,3 - 13th February 2024
- CS 298 Proposal
- Explore, preprocess All cells data
- Set up HPC, resolve memory error
- Start working on methods to choose k in k-means
CS 297
Week #15 - 5th December 2023
- Update Deliverable 4 on website
- Work on changes in Report
- Verify all deliverables on website
Week #14 - 28th November 2023
Week #13 - 21st November 2023
- Update Deliverable 3 on website
- Complete Deliverable 4
- Work on Report
Week #12 - 14th November 2023
- Update Deliverable 3 on website
- Add slides for Visualization techniques on website
- Start Deliverable 4: Neural Network to classify cell types
Week #11 - 7th November 2023
- D2 - Find answers to questions on concepts
- D2 - Update on website
- D3 - Implement Binary classification on Heart data
Week #10 - 31th October 2023
- D2 - implement classification and clustering algorithms on dataset
- D3 - Visualiztion Techniques Presentation
- Read Tabula Sapiens Paper
Week #9 - 24th October 2023
Week #8 - 17th October 2023
- Update D1 and slides on website
- Understand Classification/ Clustering Algorithms
- D2 - Implement some algorithms on data
Week #7 - 10th October 2023
- Deliverable 2 Intro Presentation
- Link colab to website
- D1 update
Week #6 - 3rd October 2023
- Complete Deliverable 1 in Python locally
- Link colab to website
- Clustering and Classification Slides
Week #5 - 26th September 2023
- Complete Deliverable 1 website update
- Link Deliverable 1 slides, colab to website
- Work on D1 in Jupyter Notebook
Week #4 - 19th September 2023
- Add Deliverable 1 code to website
- Upload Deliverable 1 Slides
- Install Jupyter Notebook in Local machine and execute D1 code
Week #3 - 12th September 2023
Meeting Summary:
Quick review of the previous meeting
Presented Deliverable 1
Proposal, Bio, and Blog
To-Do List:
- Organize Deliverable 1
- Modify proposal, blog, bio
- Finish Candidacy Form
Week #2 - 5th September 2023
Meeting Summary:
Finished personal account for the department server
Discussed project proposal
Assigned Deliverable 1
To-Do List:
Set up bio, blog, and proposal pages
Complete Deliverable 1 - explore Dataset and analyze
Week #1 - 29th August 2023
Meeting Summary:
Set up meeting times
Discussed project overview
To-Do List:
Find research papers/references for the project topic
Finish project proposal
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