| Sami Khuri's Master Thesis Students at SJSU |
Advisor of:
[30] Euna Park. Exact and Approximation Algorithms for Computing Reversal Distances in Genome Rearrangement . Defended in May 2008.
[29] Ching Chia Li. DNA Fragment Assembly Algorithms: Towards a Solution for Long Repeats . Defended in May 2008.
[28] Amie Radenbaugh. Applications of Genetic Algorithms in Bioinformatics. Defended in April 2008.
[27] George Shalu. Creating an Internet-Based Database of Beta Thalassemia Mutations. Defended in April 2008.
[26] Prafulla Basavaraja. Visualization of Mutations in the Beta Globin Gene that cause Beta Thalassemia. Defended in November 2007.
[25] Douglas Simmons. Prediction of Alternative Splice Sites in Human Genes. Defended in May 2007.
[24] Lisa Yu. RNA Secondary Structure Prediction Algorithms. Defended in Decenber 2006.
[23] Anannya Sengupta. Clustering Algorithms for Microarray Analysis. Defended in Decenber 2006.
[22] Brandon Hunter. Visualization of RNA Secondary Structure Prediction Algorithms. Defended in Decenber 2006.
[21] Nikhila Rao. Operon Prediction in Cyanobacteria using Comparative Genomics. Defended in May 2005.
[20] Priya Mathew. An Integrative Bioinfomatics Tool for Protein Sequence Analysis. Defended in December 2004.
[19] Jimmy Yu. Design and Analysis of Linear Discriminant Analysis and Hidden Markov Models as Gene Prediction Algorithms. Defended in December 2003.
[18] Ananth Prasad. Visualization of BLAST and PSI-BLAST in Bioinformatics. Defended in November 2003.
[17] Elo Leung. Using the Fuzzy C-Means Algorithm to Cluster Microarray Data. Defended in November 2003.
[16] Vidyagauri Nadkarni. Assembling DNA Fragments with Genetic Algorithms. Defended in May 2003.
[15] Lishan Li. Computational Techniques for the DNA Fragment Assembly Problem. Defended in May 2003.
[14] Chen Yang. Visualization of Phylogenetic Tree Construction Algorithms. Defended in May 2003.
[13] Yimin Jing. Exact and Heuristic Algorithms for the DNA Fragment Assembly Problem. Defended in May 2003.
[12] Radhika Ravirala. Multiple Sequence Alignment using Genetic Algorithms. Defended in January 2003.
[11] Eleanor Zhou. Java Visualization of Dynamic Programming Algorithms for Protein and Genomic Sequence Alignment Problems. Defended in December 2002.
[10] Radhika Madaan. Generic Framework for Web Applications using XML. Defended in December 2001.
[9] Tristan Marly. DNA Fragment Assembly Using Genetic Algorithms. Defended in May 1999.
[8] Hsiu-Chin Hsu. Visualization of Algorithms from Data Compression and Operating Systems. Defended in April 1999.
[7] Ping Wu. Java Implementation of Concurrent Programming Applications from Operating Systems. Defended in April 1999.
[6] Barbara Vendelin. An Algorithm for the Network Design Problem. Defended in April 1999.
[5] Annapoorani Ganesan. Algorithms for the Job Shop Scheduling Problem. Defended in December 1998.
[4] Sowmya Miryala. Heuristic Techniques for the Open Shop Scheduling Problem. Defended in November 1998.
[3] Srilatha Moturi. Performance of Decoding Algorithms for Group Codes. Defended in December 1997.
[2] Flora Ai-Hua Chung. Heuristic Algorithms for Graph Coloring Problems. Defended in September 1997.
[1] Teresa Li-Pei Chiu. Heuristic Algorithms for the Terminal Assignment Problem. Defended in May 1996.
MS Thesis Committee Member of:
Nora Pakulis. Bioinformatics, Microbial Physiology, and Immunology. Defended in June 2007.
Khoi Vu Nguyen. A hierarchical trusted third-party system for secure peer-to-peer transactions. Defended in April 2007.
Sudhanthira Shanmugam. Bioinformatics, Genetics and Immunology. Defended in March 2007.
Narayana Kashyap. A meaningful MD5 collision attack. Defended in September 2006.
Sabrina Qian Li. ASH - A Scheduler for HOAs. Defended in September 2005.
Hemlata Arcot. Perception-Based Fuzzy Information Retrieval. Defended in November 2003.
Bo Chen. Dynamic Site Map Visualization. Defended in May 2003.
Hong Li. Reliable Multicast Congestion Control for TCP/IP in Heterogeneous Wired/Wireless/Mobile Networks. Defended in May 2002.
Yifan Gao. Protecting Digital Images with Invisible Digital Watermarks. Defended in May 1999.
Suhair Halteh. A Distributive Alarm Notification System. Defended in May 1999.
Otto Leung. Seashell Patterns With Cellular Automata. Defended in April 1999.
Hua Mei. Supporting TCP via Unicast and Multicast GFR over ATM Networks. Defended in April 1999.
Terrance Bing-Parks. A Visualization of a Quantum Mechanical Search Algorithm. Defended in April 1999.
John Swapceinski. Java Implementation of the Knuth-Bendix Algorithm. Defended in April 1999.
Ashima Verma. Modeling and Evaluation of High Speed LAN Switches. Defended in December 1998.
Asha Kalyur. Process Migration in Sparta. Defended in December 1998.
Surekha Nidamarty. Workflow Framework. Defended in October 1998.
Bennett Niizawa. Multicasting ABR Rate Control Protocols for Hybrid Wired/Wireless ATM Networks. Defended in May 1998.
Savitha S. Rao. Instruction Scheduling, RISC Machines and Code Optimization. Defended in August 1997.
Martin F. Schlapfer. A Comparison of Genetic and Other Algorithms for the Traveling Salesman Problem. Defended in May 1997.
Sandeep Shenoy. ATM ABR Protocol: Validation and Performance Evaluation. Defended in May 1997.