CS122 counts as an elective for the BS in Computer Science.

CS122 counts as an elective for the MS in Computer Science.

Interesting links

Online free PERL books

Information about the Instructor

Name: Sami Khuri
Office: 418 MacQuarrie Hall
Phone: 924-5081
Office Hours: Tuesdays and Thursdays: 13:15 to 14:15.

Catalogue Description

This course introduces the Perl programming language with an emphasis on data manipulation, file processing and database access. The course will deal with real life applications in various fields such as system administration, networking and bioinformatics.

Prerequisites

Textbook

Learning Perl, by Randal L. Schwartz, Brian Foy, Tom Phoenix; 390 pages; O'Reilly Media, Inc.; Sixth Edition (June 2011) ISBN: 1449303587.

1. No need to purchase the book. It is online from MLK library.
2. We shall cover the first 12 chapters and some selected chapters from the rest of the textbook.
3. Before reaching the end of a chapter, I shall announce which topics of the following chapter we shall cover.
4. I shall make a copy of my powerpoint slides in pdf (6 slides per page) available to the class.
5. The book has a few errors: Errata for Learning Perl.

Student Learning Objectives

The main objective of the course is to train students in becoming Perl programmers. At the end of the course, students will have a good working knowledge of the Perl programming language. More specifically, students will be able to develop algorithms through the process of top-down, stepwise refinement and implement them in Perl. Students will be able to write scripts and programs to handle applications in various fields, such as system administration and bioinformatics.

Course Requirements

1. Dual Role of MH422: Lecture/Lab
   MH422 will be used as a dual purpose room. It can be a regular lecture room or it can be a computer laboratory for hands-on exercises.
   
   Lecture Mode: This is when MH422 is used as a regular lecture room. Students are expected to listen and follow the lecture. Be considerate to your classmates and follow the lecture. Do not use the computer and/or talk to your neighbor.
   Lab Mode: This is when MH422 is used as a computer lab. Use the computers and share your ideas and solutions with your classmates.
   
   We shall alternate between the two modes. A typical class will begin with a short lecture (Lecture Mode) followed by a hands-on (Lab Mode).

2. Hands-On Exercises:
   We will have a number of hands-on exercises. The purpose of the hands-on exercises is to develop your understanding of the material and your skills in problem-solving and Perl programming. You will be asked to come to the front of the class and to go through your solutions (programs) and share them with (explain them to) the rest of the class.
   

3. If you have the book, bring it to every class.
   
   

4. Term Project:
   There will be a PERL programming group project. Each group consists of two or three students. More infromation about the topic of the project will be given in February. The term-project is due on Thursday, May 9, 2013.

5. Exams:
   Exam One: Thursday, March 7, 2013.
   Exam Two: Thursday, May 2, 2013.
   Final Exam: Tuesday, May 21, 2013, from 9:45 to 12:00pm (noon).

   Exam One and Exam Two are each one hour and fifteen minutes long. All exams are in-class, closed-book and comprehensive. You will get back your exams within one week at which time we'll go over them in class. Exams will be collected and kept with me. There will be no make-up exams.

Class Attendance

Class attendance is strongly encouraged. In class, we shall cover many topics and examples that are neither in the class notes nor in the textbook. If you miss a lecture, it is your responsibility to find out what was covered in class (this includes: handouts given out during your absence, corrected typos and errors, examples discussed in class - that are neither in the book nor in the notes - clarifications and changes made to the hands-on exercises or the project, etc...).

Grading Policy

The final grade will be computed as shown below:

Hands-On: 20%
Term Project: 20%
Exam One: 20%
Exam Two: 20%
Final: 20%

[97, 100] A+
[93, 97) A
[90, 93) A-
[87, 90) B+
[82, 87) B
[80, 82) B-
[77, 80) C+
[72, 77) C
[70, 72) C-
[67, 70) D+
[62, 67) D
[60, 62) D-
[0, 60) F

Add/Drop Policy

For those wishing to add this course, the deadline is February 11, 2013. The last day to drop with a full refund is February 4, 2013. According to University and Department guidelines, dropping after February 4, 2013, requires a serious and compelling reason to drop a course. Grades alone do not constitute reason to drop a course. Students who stop attending without officially dropping will be issued a U at the end of the semester which is counted as an F in calculations of GPA. See University Catalog.

Academic Integrity

Students should read the ``Policy on Academic Integrity" in the University Catalog. Anyone caught cheating (including copying the work of others) on any assignment in the class will receive a failing grade for the assignment, in addition to other sanctions that are permitted by the University, including but not limited to the filing of a report with the Dean of Student Services and expulsion from the University. Students should read the ``Policy on Academic Integrity" in the University Catalog. The "Policy on Academic Integrity" can be found here.

• Anyone caught cheating (including copying the work of others) on any assignment in the class will receive a failing grade for the assignment, in addition to other sanctions that are permitted by the University, including but not limited to the filing of a report with the Dean of Student Services and expulsion from the University.
• Your own commitment to learning, as evidenced by your enrollment at San José State University, and the Universitys Academic Integrity Policy requires you to be honest in all your academic course work. Faculty are required to report all infractions to the Office of Judicial Affairs.

Disability Resource Center

If you need course adaptations or accommodations because of a disability, or if you need special arrangements in case the building must be evacuated, please make an appointment with me as soon as possible, or see me during office hours. Presidential Directive 97-03 requires that students with disabilities register with DRC to establish a record of their disability.